STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72172.1Identified by match to protein family HMM PF00582. (130 aa)    
Predicted Functional Partners:
ABK70628.1
Integral membrane protein.
 
    0.906
ABK72071.1
Identified by match to protein family HMM PF03401.
 
    0.856
ABK76022.1
Integral membrane protein; Identified by match to protein family HMM PF01970.
 
    0.844
ABK71390.1
Identified by match to protein family HMM PF00582.
   
  
 0.816
ABK75086.1
Universal stress protein family protein, putative; Identified by match to protein family HMM PF00582.
   
  
 0.813
ABK73898.1
Identified by match to protein family HMM PF00582.
      
 0.811
ABK75323.1
Identified by match to protein family HMM PF00582.
  
  
 0.808
ABK72096.1
Identified by match to protein family HMM PF00582.
   
  
 0.778
ABK73445.1
Identified by match to protein family HMM PF00582.
   
  
 0.777
ABK70785.1
Universal stress protein family protein, putative; Identified by match to protein family HMM PF00582.
   
  
 0.777
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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