STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72204.1Putative pterin-4-alpha-carbinolamine dehydratase; Identified by match to protein family HMM PF01329. (94 aa)    
Predicted Functional Partners:
ABK71553.1
Hypothetical protein; Identified by Glimmer2; putative.
  
 
  0.904
ABK73599.1
CTP pyrophosphohydrolase; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
  
  
 0.661
pimE
Conserved transmembrane protein; Catalyzes the alpha-1,2 addition of a mannose residue from polyprenol-phosphate-mannose (PPM) to a monoacyl phosphatidylinositol pentamannoside (AcPIM5) to generate a monoacyl phosphatidylinositol hexamannoside (AcPIM6).
  
  
 0.605
hmgA
Homogentisate 1,2-dioxygenase; Identified by match to protein family HMM PF04209.
  
  
 0.545
mce
methylmalonyl-CoA epimerase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081.
  
  
 0.460
ABK70296.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.454
ABK71915.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07287.
  
  
 0.440
ABK72169.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07287.
  
  
 0.440
ABK73728.1
5'-nucleotidase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549.
  
  
 0.432
ABK72182.1
Phosphonoacetaldehyde hydrolase; Identified by match to protein family HMM PF00702.
  
  
 0.432
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (26%) [HD]