STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69964.1Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. (218 aa)    
Predicted Functional Partners:
ABK69653.1
Conserved hypothetical protein.
  
    0.885
ABK70077.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.784
ABK73093.1
Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily.
   
  
 0.758
ABK72696.1
Conserved hypothetical protein.
  
    0.756
ABK70804.1
Conserved hypothetical protein.
 
    0.747
ABK69890.1
Conserved hypothetical protein.
  
    0.729
ABK75942.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Identified by match to protein family HMM PF00355.
 
    0.725
ABK75690.1
Conserved hypothetical protein.
 
    0.721
ABK74693.1
Conserved hypothetical protein.
  
    0.717
ABK76005.1
Conserved hypothetical protein.
 
    0.717
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.