STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0864Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798. (208 aa)    
Predicted Functional Partners:
MXAN_0865
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
   0.783
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.680
selO
Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).
       0.580
lysS
lysyl-tRNA synthetase; Identified by similarity to SP:P14825; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.543
ppa
Inorganic pyrophosphatase; Identified by similarity to SP:P38576; match to protein family HMM PF00719.
  
 
 0.539
MXAN_0866
Dps family protein; Identified by similarity to PDB:1O9R_A; match to protein family HMM PF00210; Belongs to the Dps family.
  
  
 0.533
MXAN_2239
NADPH-dependent FMN reductase; Identified by match to protein family HMM PF03358.
  
  
 0.528
MXAN_6498
NADPH-dependent FMN reductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358.
  
  
 0.528
MXAN_0640
Conserved hypothetical protein; Identified by match to protein family HMM PF06041.
  
     0.518
MXAN_0874
Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798.
 
  
 0.516
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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