STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0973Hypothetical protein; Identified by Glimmer2; putative. (92 aa)    
Predicted Functional Partners:
MXAN_0972
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_0974
Hypothetical protein; Identified by Glimmer2; putative.
       0.746
MXAN_0971
Aspartate kinase/homoserine dehydrogenase; Identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
       0.572
MXAN_0969
Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212.
       0.523
MXAN_0970
Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM PF03841.
       0.523
MXAN_0975
Hypothetical protein; Identified by Glimmer2; putative.
       0.469
MXAN_0976
Putative lipoprotein.
       0.405
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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