STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_0996Tryptophan halogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820; match to protein family HMM PF07992. (390 aa)    
Predicted Functional Partners:
MXAN_1608
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.805
MXAN_1609
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.805
MXAN_1285
Tryptophan halogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04820; match to protein family HMM PF07992.
  
     0.727
etfB
Electron transfer flavoprotein, beta subunit; Identified by match to protein family HMM PF01012.
  
 
 0.608
etfA
Electron transfer flavoprotein, alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.516
MXAN_4899
Sigma-54 dependent transcriptional regulator, Fis family; Identified by match to protein family HMM PF00158; match to protein family HMM PF00498; match to protein family HMM TIGR01199.
     
 0.458
MXAN_3779
Non-ribosomal peptide synthetase/polyketide synthase; Identified by similarity to GB:AAF15891.2; match to protein family HMM PF00109; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
  
 0.447
MXAN_0326
Phage tail collar domain protein; Identified by match to protein family HMM PF07484.
  
    0.444
MXAN_4275
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.434
MXAN_3462
Polyketide synthase type I; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
 
 
 0.401
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.