Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MXAN_1101 | MXAN_2688 | MXAN_1101 | MXAN_2688 | UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | 0.646 |
MXAN_1101 | MXAN_2689 | MXAN_1101 | MXAN_2689 | UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF00984; match to protein family HMM PF02737; match to protein family HMM PF03446; match to protein family HMM PF03720; match to protein family HMM PF03721; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.998 |
MXAN_1101 | MXAN_3262 | MXAN_1101 | MXAN_3262 | UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase 1 family protein; Identified by similarity to SP:O06204. | 0.440 |
MXAN_1162 | MXAN_2638 | MXAN_1162 | MXAN_2638 | Putative lipoprotein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.772 |
MXAN_1162 | MXAN_2688 | MXAN_1162 | MXAN_2688 | Putative lipoprotein. | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | 0.575 |
MXAN_1162 | MXAN_3231 | MXAN_1162 | MXAN_3231 | Putative lipoprotein. | Conserved hypothetical protein; Identified by similarity to GB:AAR35335.1. | 0.551 |
MXAN_1162 | MXAN_3233 | MXAN_1162 | MXAN_3233 | Putative lipoprotein. | Conserved hypothetical protein; Identified by similarity to GB:AAM23573.1. | 0.536 |
MXAN_1162 | MXAN_3262 | MXAN_1162 | MXAN_3262 | Putative lipoprotein. | Glycosyltransferase 1 family protein; Identified by similarity to SP:O06204. | 0.711 |
MXAN_1162 | MXAN_5319 | MXAN_1162 | MXAN_5319 | Putative lipoprotein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.772 |
MXAN_2638 | MXAN_1162 | MXAN_2638 | MXAN_1162 | Hypothetical protein; Identified by Glimmer2; putative. | Putative lipoprotein. | 0.772 |
MXAN_2638 | MXAN_2688 | MXAN_2638 | MXAN_2688 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | 0.578 |
MXAN_2638 | MXAN_3231 | MXAN_2638 | MXAN_3231 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to GB:AAR35335.1. | 0.605 |
MXAN_2638 | MXAN_3233 | MXAN_2638 | MXAN_3233 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to GB:AAM23573.1. | 0.601 |
MXAN_2638 | MXAN_3262 | MXAN_2638 | MXAN_3262 | Hypothetical protein; Identified by Glimmer2; putative. | Glycosyltransferase 1 family protein; Identified by similarity to SP:O06204. | 0.715 |
MXAN_2638 | MXAN_5319 | MXAN_2638 | MXAN_5319 | Hypothetical protein; Identified by Glimmer2; putative. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.766 |
MXAN_2688 | MXAN_1101 | MXAN_2688 | MXAN_1101 | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.646 |
MXAN_2688 | MXAN_1162 | MXAN_2688 | MXAN_1162 | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | Putative lipoprotein. | 0.575 |
MXAN_2688 | MXAN_2638 | MXAN_2688 | MXAN_2638 | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | Hypothetical protein; Identified by Glimmer2; putative. | 0.578 |
MXAN_2688 | MXAN_2689 | MXAN_2688 | MXAN_2689 | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | Lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF00984; match to protein family HMM PF02737; match to protein family HMM PF03446; match to protein family HMM PF03720; match to protein family HMM PF03721; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.723 |
MXAN_2688 | MXAN_3231 | MXAN_2688 | MXAN_3231 | Conserved hypothetical protein; Identified by similarity to GB:CAB58329.1; match to protein family HMM PF07940. | Conserved hypothetical protein; Identified by similarity to GB:AAR35335.1. | 0.575 |
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