STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3431Outer membrane efflux protein; Identified by match to protein family HMM PF02321. (502 aa)    
Predicted Functional Partners:
MXAN_3432
Multicopper oxidase domain protein; Identified by match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732.
 
   
 0.891
MXAN_3425
Multicopper oxidase domain protein; Identified by match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409.
 
   
 0.787
cumA
Multicopper oxidase; Identified by similarity to GB:AAD24211.1; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732.
 
   
 0.720
MXAN_1788
Identified by match to protein family HMM PF00529.
 
 
 0.643
MXAN_4175
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.578
MXAN_7147
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.
  
 
 0.578
MXAN_6245
Kelch motif/HYR domain protein; Identified by match to protein family HMM PF01344; match to protein family HMM PF02494; match to protein family HMM PF07646.
  
     0.415
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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