STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3871Putative membrane protein; Identified by similarity to GB:AAS69492.1. (401 aa)    
Predicted Functional Partners:
MXAN_3875
Oxidoreductase, iron-sulfur binding subunit; Identified by match to protein family HMM PF00037.
 
 
 0.996
MXAN_5557
Putative iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF04879; match to protein family HMM TIGR01409.
 
 
 0.984
MXAN_6079
Putative molybdopterin oxidoreductase, iron-sulfur binding subunit; Identified by similarity to SP:O29751; match to protein family HMM PF00037.
 
 
 0.984
MXAN_3874
Oxidoredutase membrane subunit, NrfD family; Identified by match to protein family HMM PF03916.
 
 
 0.968
MXAN_3876
Putative cytochrome c.
 
 
 0.966
MXAN_3873
Conserved hypothetical protein.
 
 
 0.964
MXAN_3872
Conserved hypothetical protein.
 
 
 0.963
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
   
 0.877
coxC
Cytochrome c oxidase, subunit III.
 
    0.875
ctaD
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
    0.875
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.