STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3872Conserved hypothetical protein. (226 aa)    
Predicted Functional Partners:
MXAN_3875
Oxidoreductase, iron-sulfur binding subunit; Identified by match to protein family HMM PF00037.
 
 
 0.988
ccoNO
Cytochrome c oxidase, cbb3-type, subunit I/II; Identified by match to protein family HMM PF00115; match to protein family HMM PF02433; match to protein family HMM TIGR00780; match to protein family HMM TIGR00781; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.982
MXAN_3874
Oxidoredutase membrane subunit, NrfD family; Identified by match to protein family HMM PF03916.
 
 
 
 0.965
MXAN_3871
Putative membrane protein; Identified by similarity to GB:AAS69492.1.
 
 
 0.963
MXAN_3876
Putative cytochrome c.
 
 
 
 0.963
MXAN_3873
Conserved hypothetical protein.
 
     0.952
MXAN_6079
Putative molybdopterin oxidoreductase, iron-sulfur binding subunit; Identified by similarity to SP:O29751; match to protein family HMM PF00037.
 
 
 0.952
MXAN_5557
Putative iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF04879; match to protein family HMM TIGR01409.
 
 
 0.950
coxC
Cytochrome c oxidase, subunit III.
 
 
 0.945
coxB
Cytochrome c oxidase, subunit II; Identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM TIGR02866.
 
 
 0.944
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.