STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5157Conserved hypothetical protein; Identified by similarity to GB:AAL22880.1. (102 aa)    
Predicted Functional Partners:
MXAN_5158
Identified by match to protein family HMM PF03591.
 
   
 0.954
MXAN_5466
Peptidase, S1E (streptogrisin A) subfamily; Identified by similarity to SP:Q05308; match to protein family HMM PF00089; match to protein family HMM PF00652.
  
     0.639
MXAN_1237
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.551
MXAN_5156
Hypothetical protein; Identified by Glimmer2; putative.
       0.528
fadJ-2
Fatty oxidation complex, alpha subunit; Identified by similarity to SP:P77399; match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF01210; match to protein family HMM PF02737.
  
     0.507
MXAN_2293
Conserved hypothetical protein; Identified by similarity to PIR:T29112; match to protein family HMM PF04672.
  
     0.500
MXAN_4277
Peptidase, S1A (chymotrypsin) subfamily; Identified by similarity to GB:BAA22400.1; match to protein family HMM PF00089.
  
     0.500
MXAN_5394
Peptidase, S1A (chymotrypsin) subfamily; Identified by match to protein family HMM PF00089.
  
     0.483
MXAN_0112
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
   
 0.482
MXAN_2234
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
  
     0.479
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.