STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5264Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. (315 aa)    
Predicted Functional Partners:
MXAN_5265
Kelch domain protein; Identified by match to protein family HMM PF01344; match to protein family HMM PF07646.
     
 0.940
MXAN_5263
RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.919
MXAN_5262
Putative lipoprotein.
     
 0.917
MXAN_0974
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.807
MXAN_0506
Monooxygenase, flavin-contaning; Identified by similarity to PIR:JC7986; match to protein family HMM PF00743.
  
    0.500
MXAN_2872
Monooxygenase, flavin-binding family; Identified by match to protein family HMM PF00743.
  
    0.500
cumA
Multicopper oxidase; Identified by similarity to GB:AAD24211.1; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732.
 
   
 0.483
MXAN_6756
Conserved hypothetical protein.
  
    0.463
MXAN_2879
Putative xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.
  
    0.456
MXAN_5261
Putative lipoprotein.
       0.435
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.