STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5503Polar amino acid transport system substrate-binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (481 aa)    
Predicted Functional Partners:
MXAN_5502
Putative amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P37774; match to protein family HMM PF00005.
 
 0.999
argG
Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM PF06508; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.768
argH
Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838.
  
  
 0.754
difG
Fibril biogenesis regulator DifG; Truncated at the N-terminus. Starts with a GTG about 35 codons upstream (Zhaomin); identified by similarity to GB:AAP97128.1; match to protein family HMM PF04509.
    
   0.754
MXAN_3917
Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
  
 0.705
MXAN_7336
Conserved hypothetical protein.
  
 
 0.667
MXAN_2018
Putative oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Identified by similarity to SP:P24141; match to protein family HMM PF00496.
  
 
 0.650
MXAN_7225
Putative sugar ABC transporter, ATP-binding protein; Identified by similarity to SP:Q01937; match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
 
 
 0.627
MXAN_5852
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
  
 
 0.620
cysT
Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.618
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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