trmB protein (Myxococcus xanthus) - STRING interaction network

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trmB

Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (206 aa)

Predicted Functional Partners:

truB

0.766

truD-2

0.741

truB-2

0.734

truD

0.714

MXAN_0954

0.708

rsmB

0.708

MXAN_3707

0.708

MXAN_6701

0.680

rrmJ

0.676

rumA

0.644

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MXAN_0954	rrmJ	MXAN_0954	MXAN_2973	Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.649
MXAN_0954	rumA	MXAN_0954	MXAN_3787	Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by similarity to SP:P55135; match to protein family HMM PF02390; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.628
MXAN_0954	trmB	MXAN_0954	MXAN_5790	Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.	Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.708
MXAN_0954	truB	MXAN_0954	MXAN_2071	Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.428
MXAN_0954	truB-2	MXAN_0954	MXAN_7359	Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.428
MXAN_3707	rrmJ	MXAN_3707	MXAN_2973	Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.649
MXAN_3707	rumA	MXAN_3707	MXAN_3787	Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by similarity to SP:P55135; match to protein family HMM PF02390; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.628
MXAN_3707	trmB	MXAN_3707	MXAN_5790	Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.	Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.708
MXAN_3707	truB	MXAN_3707	MXAN_2071	Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.428
MXAN_3707	truB-2	MXAN_3707	MXAN_7359	Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.428
MXAN_6701	trmB	MXAN_6701	MXAN_5790	Conserved hypothetical protein.	Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.680
rrmJ	MXAN_0954	MXAN_2973	MXAN_0954	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.	0.649
rrmJ	MXAN_3707	MXAN_2973	MXAN_3707	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.	0.649
rrmJ	rsmB	MXAN_2973	MXAN_1401	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.749
rrmJ	rumA	MXAN_2973	MXAN_3787	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by similarity to SP:P55135; match to protein family HMM PF02390; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.423
rrmJ	trmB	MXAN_2973	MXAN_5790	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.676
rrmJ	truB	MXAN_2973	MXAN_2071	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.682
rrmJ	truB-2	MXAN_2973	MXAN_7359	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.633
rrmJ	truD	MXAN_2973	MXAN_3958	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	tRNA pseudouridine synthase D; Identified by match to protein family HMM PF01142.	0.420
rsmB	rrmJ	MXAN_1401	MXAN_2973	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.749