STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6044TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. (682 aa)    
Predicted Functional Partners:
MXAN_6045
Putative lipoprotein.
       0.806
MXAN_6845
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
 
 0.751
MXAN_1688
Identified by match to protein family HMM PF00593; match to protein family HMM PF03544; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
 
 0.691
MXAN_7238
Efflux transporter, HAE1 family, outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
   
 0.666
tonB-3
Ferric siderophore transporter, periplasmic energy transduction protein TonB; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 0.663
MXAN_5030
Efflux transporter, HAE1 family, outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
   
 0.648
tonB-2
Ferric siderophore transporter, periplasmic energy transduction protein TonB; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 0.646
MXAN_3618
Non-ribosomal peptide synthetase; Identified by similarity to GB:AAC80285.1; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733.
  
  
 0.645
MXAN_3905
Efflux transporter, outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
   
 0.630
MXAN_6997
tonB domain protein; Identified by match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
 
 0.628
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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