STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6272Conserved hypothetical protein; Identified by similarity to GB:AAS69482.1. (416 aa)    
Predicted Functional Partners:
MXAN_6775
Putative lipoprotein.
  
     0.752
MXAN_2142
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.609
MXAN_1789
ABC transporter, ATP-binding protein/peptidase, C39 family; Identified by match to protein family HMM PF00005; match to protein family HMM PF03412.
 
  
 0.536
MXAN_4545
Tetratricopeptide repeat protein; Identified by similarity to GB:AAS71746.1; match to protein family HMM PF07719.
  
     0.483
MXAN_0856
Identified by match to protein family HMM PF00593; match to protein family HMM PF03544; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
 
 
 0.476
MXAN_7173
Hypothetical protein; Identified by Glimmer2; putative.
  
   0.463
MXAN_6502
Hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.456
MXAN_0277
Putative membrane protein.
  
   0.452
MXAN_2876
Hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.452
MXAN_6685
Putative lipoprotein.
  
     0.448
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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