STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssnAssnA protein; Identified by similarity to SP:Q46812; match to protein family HMM PF01979. (430 aa)    
Predicted Functional Partners:
hutF
Formiminoglutamate deiminase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR02022.
  
     0.746
bglA
Identified by similarity to SP:P10482; Belongs to the glycosyl hydrolase 1 family.
      
 0.630
MXAN_6310
Identified by match to protein family HMM PF00578.
  
    0.624
MXAN_3144
Putative xanthine dehydrogenase accessory factor; Identified by similarity to GB:CAB41849.1; match to protein family HMM PF02625.
 
    0.587
MXAN_6312
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
       0.507
MXAN_3143
Putative xanthine dehydrogenase; Identified by similarity to SP:P22985; match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738; match to protein family HMM PF03450.
 
  
 0.434
MXAN_6313
Putative lipoprotein; Identified by similarity to GB:AAS05967.1.
       0.404
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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