STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6579Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. (669 aa)    
Predicted Functional Partners:
MXAN_6576
Identified by match to protein family HMM PF01497.
 
  
 0.844
MXAN_6577
Putative lipoprotein.
 
     0.838
MXAN_6575
Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.823
MXAN_4559
Putative tonB dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
   
 0.775
MXAN_4365
Transporter, outer membrane receptor (OMR) family; Identified by similarity to SP:P17315; match to protein family HMM PF00593; match to protein family HMM PF07715.
 
  
 0.771
tonB-3
Ferric siderophore transporter, periplasmic energy transduction protein TonB; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 0.714
tonB-2
Ferric siderophore transporter, periplasmic energy transduction protein TonB; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 
 0.681
MXAN_2422
Hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.673
tonB
Ferric siderophore transporter, periplasmic energy transduction protein TonB; Identified by similarity to GB:AAF04082.1; match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 
 0.638
MXAN_5755
Identified by match to protein family HMM TIGR01352.
 
 
 0.638
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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