STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_7023Putative lipoprotein. (730 aa)    
Predicted Functional Partners:
MXAN_7024
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM TIGR02266.
  
    0.572
MXAN_7022
Putative multidrug resistance protein NorM; Identified by similarity to SP:P37340; match to protein family HMM PF01554; match to protein family HMM TIGR00797.
       0.480
MXAN_4951
ICE-like protease (caspase) p20 domain protein; Identified by match to protein family HMM PF00656.
  
    0.477
MXAN_3697
Conserved hypothetical protein; Identified by similarity to GB:CAD21634.1.
  
     0.432
MXAN_7025
Identified by match to protein family HMM PF00012; Belongs to the heat shock protein 70 family.
       0.430
MXAN_2420
Putative lipoprotein; Identified by similarity to SP:Q45535.
  
     0.400
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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