STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_7395General secretion pathway protein, GspG family; Identified by similarity to GB:AAD05177.1. (140 aa)    
Predicted Functional Partners:
MXAN_2509
Conserved hypothetical protein.
  
     0.710
MXAN_7396
Response regulator/adenylate cyclase; Identified by similarity to SP:P40138; match to protein family HMM PF00072; match to protein family HMM PF00211.
  
    0.631
MXAN_7397
Identified by match to protein family HMM PF00691; match to protein family HMM PF02412.
       0.590
MXAN_7398
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518.
       0.590
MXAN_7394
Identified by match to protein family HMM PF00582.
       0.463
MXAN_7399
Hypothetical protein; Identified by Glimmer2; putative.
       0.419
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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