CUS_6857 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_6857

Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532. (572 aa)

Predicted Functional Partners:

CUS_6688

0.759

CUS_7983

0.757

CUS_5269

0.754

CUS_7148

0.736

CUS_5644

0.672

CUS_6122

0.672

CUS_6675

0.660

CUS_7182

0.648

pyk

0.647

CUS_4653

0.644

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_4653	CUS_6857	CUS_4653	CUS_6857	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.	0.644
CUS_5269	CUS_5644	CUS_5269	CUS_5644	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.672
CUS_5269	CUS_6122	CUS_5269	CUS_6122	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.672
CUS_5269	CUS_6857	CUS_5269	CUS_6857	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.	0.754
CUS_5269	CUS_7983	CUS_5269	CUS_7983	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.773
CUS_5269	pyk	CUS_5269	CUS_6706	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.	0.647
CUS_5644	CUS_5269	CUS_5644	CUS_5269	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6122	CUS_5644	CUS_6122	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	0.999
CUS_5644	CUS_6688	CUS_5644	CUS_6688	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_6857	CUS_5644	CUS_6857	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_7148	CUS_5644	CUS_7148	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_5644	CUS_7983	CUS_5644	CUS_7983	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.672
CUS_6122	CUS_5269	CUS_6122	CUS_5269	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_6122	CUS_5644	CUS_6122	CUS_5644	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Putative linear gramicidin synthetase LgrC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733.	0.999
CUS_6122	CUS_6688	CUS_6122	CUS_6688	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Putative catabolite control protein A; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_6122	CUS_6857	CUS_6122	CUS_6857	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.	0.672
CUS_6122	CUS_7148	CUS_6122	CUS_7148	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Sugar-binding domain protein; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.	0.672
CUS_6122	CUS_7983	CUS_6122	CUS_7983	AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01553; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.	Sugar-binding domain protein; Identified by match to protein family HMM PF00532.	0.672
CUS_6675	CUS_6857	CUS_6675	CUS_6857	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF00532.	0.660
CUS_6675	CUS_7182	CUS_6675	CUS_7182	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.	Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.	0.790