STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS_7813Conserved domain protein. (181 aa)    
Predicted Functional Partners:
CUS_7812
Putative stage III sporulation protein AG.
 
  
 0.997
CUS_7806
Putative stage III sporulation protein AA.
 
  
 0.965
CUS_7810
Putative stage III sporulation protein AE.
 
  
 0.952
CUS_7808
Stage III sporulation protein AC; Identified by match to protein family HMM PF06686; match to protein family HMM TIGR02848.
 
  
 0.949
CUS_7809
Putative stage III sporulation protein AD.
 
  
 0.875
spoIIP
Stage II sporulation protein P; Identified by match to protein family HMM PF07454; match to protein family HMM TIGR02867.
  
   
 0.855
CUS_7587
Conserved domain protein.
  
    0.763
CUS_5546
Conserved domain protein.
  
     0.739
CUS_8123
Hypothetical protein; Identified by glimmer; putative.
  
     0.733
CUS_7811
Conserved domain protein.
       0.727
Your Current Organism:
Ruminococcus albus 8
NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.