Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIMG_00793 | CIMG_01894 | J3KHR9 | J3KK66 | DNA ligase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.850 |
CIMG_00793 | CIMG_03804 | J3KHR9 | J3KC51 | DNA ligase. | DNA ligase. | 0.908 |
CIMG_00793 | CIMG_04908 | J3KHR9 | J3KEG6 | DNA ligase. | Vezatin domain-containing protein. | 0.928 |
CIMG_00793 | CIMG_04909 | J3KHR9 | J0HGE3 | DNA ligase. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.928 |
CIMG_00793 | CIMG_05230 | J3KHR9 | A0A0E1S3S8 | DNA ligase. | Replication factor C subunit 5. | 0.796 |
CIMG_00793 | CIMG_05232 | J3KHR9 | A0A0E1RXM0 | DNA ligase. | Replication factor C subunit 1. | 0.799 |
CIMG_00793 | CIMG_07623 | J3KHR9 | J3K3T1 | DNA ligase. | DNA replication factor C subunit Rfc2. | 0.877 |
CIMG_00793 | CIMG_09472 | J3KHR9 | J3K2F8 | DNA ligase. | DNA polymerase. | 0.870 |
CIMG_00793 | FEN1 | J3KHR9 | A0A0E1RY46 | DNA ligase. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.948 |
CIMG_00793 | KU80 | J3KHR9 | Q1E6K9 | DNA ligase. | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. Involved in non-homologous end joining (NHEJ) DNA double strand break repair. DNA-binding is sequence-independent but has a high affinity to nicks in double-stranded DNA and to the ends of duplex DNA. Binds to naturally occurring chromosomal ends, and therefore provides chromosomal end protection. Required also for telomere recombination to repair telomeric ends in the absence of telomerase. KU70, of the KU70/KU80 heterodimer, binds to the stem loop of TLC1, the RNA component of telomerase. I [...] | 0.813 |
CIMG_01894 | CIMG_00793 | J3KK66 | J3KHR9 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA ligase. | 0.850 |
CIMG_01894 | CIMG_03804 | J3KK66 | J3KC51 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA ligase. | 0.850 |
CIMG_01894 | CIMG_04908 | J3KK66 | J3KEG6 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Vezatin domain-containing protein. | 0.925 |
CIMG_01894 | CIMG_04909 | J3KK66 | J0HGE3 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.925 |
CIMG_01894 | CIMG_05230 | J3KK66 | A0A0E1S3S8 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Replication factor C subunit 5. | 0.929 |
CIMG_01894 | CIMG_05232 | J3KK66 | A0A0E1RXM0 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Replication factor C subunit 1. | 0.909 |
CIMG_01894 | CIMG_07623 | J3KK66 | J3K3T1 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA replication factor C subunit Rfc2. | 0.932 |
CIMG_01894 | CIMG_09472 | J3KK66 | J3K2F8 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase. | 0.969 |
CIMG_01894 | FEN1 | J3KK66 | A0A0E1RY46 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.930 |
CIMG_03804 | CIMG_00793 | J3KC51 | J3KHR9 | DNA ligase. | DNA ligase. | 0.908 |
page 1 of 5