STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmFPutative methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly (By similarity). Does not exhibit methylmalonyl- CoA mutase (MCM) activity. (1071 aa)    
Predicted Functional Partners:
NFA_34660
Putative methylmalonyl-CoA mutase alpha subunit.
 
 
0.999
NFA_34670
Putative methylmalonyl-CoA mutase beta subunit.
 
 
0.999
NFA_36600
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
  
 0.893
NFA_10740
Hypothetical protein.
 
  
 0.867
metH
Putative 5-methyltetrahydrofolate:homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.846
NFA_34650
Putative transporter ATPase/kinase.
 
  
0.843
NFA_6710
Putative acetyl-CoA carboxylase beta subunit.
     
 0.834
NFA_26940
Putative pyruvate carboxylase.
  
  
 0.796
NFA_12570
Putative fatty acid synthase.
  
  
 0.787
NFA_10330
Hypothetical protein.
 
  
 0.779
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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