Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFA_14040 | NFA_14050 | NFA_14040 | NFA_14050 | Putative transporter. | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | 0.999 |
NFA_14040 | NFA_14060 | NFA_14040 | NFA_14060 | Putative transporter. | Putative sulfate ABC transporter permease. | 0.999 |
NFA_14040 | NFA_43290 | NFA_14040 | NFA_43290 | Putative transporter. | Putative transporter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.444 |
NFA_14040 | NFA_51300 | NFA_14040 | NFA_51300 | Putative transporter. | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.406 |
NFA_14040 | cysA | NFA_14040 | NFA_14070 | Putative transporter. | Putative sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.999 |
NFA_14040 | cysD | NFA_14040 | NFA_14170 | Putative transporter. | Putative sulfate adenylyltransferase subunit 2. | 0.879 |
NFA_14040 | cysD2 | NFA_14040 | NFA_24550 | Putative transporter. | Putative sulfate adenylyltransferase subunit 2. | 0.879 |
NFA_14040 | cysN | NFA_14040 | NFA_14160 | Putative transporter. | Putative sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.887 |
NFA_14040 | cysN-2 | NFA_14040 | NFA_33920 | Putative transporter. | Putative ATP sulfurylase large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.985 |
NFA_14040 | cysN2 | NFA_14040 | NFA_24540 | Putative transporter. | Putative sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.985 |
NFA_14050 | NFA_14040 | NFA_14050 | NFA_14040 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative transporter. | 0.999 |
NFA_14050 | NFA_14060 | NFA_14050 | NFA_14060 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative sulfate ABC transporter permease. | 0.998 |
NFA_14050 | NFA_51300 | NFA_14050 | NFA_51300 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Hypothetical protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.809 |
NFA_14050 | cysA | NFA_14050 | NFA_14070 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.999 |
NFA_14050 | cysD | NFA_14050 | NFA_14170 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative sulfate adenylyltransferase subunit 2. | 0.852 |
NFA_14050 | cysD2 | NFA_14050 | NFA_24550 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative sulfate adenylyltransferase subunit 2. | 0.852 |
NFA_14050 | cysN | NFA_14050 | NFA_14160 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.891 |
NFA_14050 | cysN-2 | NFA_14050 | NFA_33920 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative ATP sulfurylase large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.983 |
NFA_14050 | cysN2 | NFA_14050 | NFA_24540 | Putative sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | Putative sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.983 |
NFA_14060 | NFA_14040 | NFA_14060 | NFA_14040 | Putative sulfate ABC transporter permease. | Putative transporter. | 0.999 |
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