STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maiAPutative maleate isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. Shows a strict specificity for maleate, with no activity detected toward structurally related substrates including citraconate, mesaconate, dimethylmaleate, and maleamide. (251 aa)    
Predicted Functional Partners:
NFA_21900
Hypothetical protein.
 
     0.933
NFA_21920
Hypothetical protein.
 
     0.932
NFA_56020
Putative succinate dehydrogenase flavoprotein subunit.
  
 
  0.904
sdhA
Putative succinate dehydrogenase flavoprotein subunit.
  
 
  0.904
NFA_56030
Putative succinate dehydrogenase iron-sulfur subunit.
    
  0.901
sdhB
Putative succinate dehydrogenase iron-sulfur subunit.
    
  0.901
sdhD
Putative succinate dehydrogenase membrane subunit.
     
  0.900
sdhC
Putative succinate dehydrogenase cytochrome b subunit.
     
  0.900
NFA_21950
Putative hydantoinase.
 
     0.869
NFA_21940
Putative hydantoinase.
 
   
 0.848
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.