STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureAPutative urease gamma subunit; Belongs to the urease gamma subunit family. (100 aa)    
Predicted Functional Partners:
ureB
Putative urease beta subunit; Belongs to the urease beta subunit family.
 0.999
ureC
Putative urease alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 0.999
ureG
Putative urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.961
NFA_22190
Putative allophanate hydrolase.
    
 0.908
ureF
Putative urease accessory protein.
 
 
 0.908
alc
Putative allantoicase; Belongs to the allantoicase family.
    
  0.905
NFA_22180
Putative amidase.
     
  0.900
ureD
Putative urease accessory protein.
  
 
 0.846
NFA_25230
Putative thioesterase.
       0.698
gltB
Putative glutamate synthase large subunit.
      
 0.542
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.