STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFA_30750Putative dehydrogenase. (351 aa)    
Predicted Functional Partners:
NFA_30760
Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.982
NFA_30730
Putative membrane protein.
     
 0.528
NFA_30740
Hypothetical protein.
       0.509
NFA_22650
Putative dehydrogenase.
 
 
0.458
katB
Putative catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.454
NFA_45080
Putative dehydrogenase.
 
 
0.445
NFA_28910
Putative dehydrogenase.
 
 
0.432
bioF
Putative 8-amino-7-oxononanoate synthase.
  
  
 0.426
NFA_35090
Putative dehydrogenase.
 
 
0.426
NFA_43230
Putative 2-amino-3-ketobutyrate CoA ligase.
  
  
 0.426
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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