Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFA_3180 | NFA_35040 | NFA_3180 | NFA_35040 | Putative aspartokinase; Belongs to the aspartokinase family. | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | 0.640 |
NFA_3180 | asd | NFA_3180 | NFA_3190 | Putative aspartokinase; Belongs to the aspartokinase family. | Putative aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.999 |
NFA_3180 | dapB | NFA_3180 | NFA_38810 | Putative aspartokinase; Belongs to the aspartokinase family. | Putative dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.916 |
NFA_35030 | NFA_35040 | NFA_35030 | NFA_35040 | Putative aldehyde dehydrogenase. | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | 0.998 |
NFA_35030 | NFA_35050 | NFA_35030 | NFA_35050 | Putative aldehyde dehydrogenase. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.645 |
NFA_35030 | NFA_35060 | NFA_35030 | NFA_35060 | Putative aldehyde dehydrogenase. | Putative transporter. | 0.402 |
NFA_35030 | NFA_35070 | NFA_35030 | NFA_35070 | Putative aldehyde dehydrogenase. | Putative glucarate dehydratase. | 0.688 |
NFA_35040 | NFA_3180 | NFA_35040 | NFA_3180 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative aspartokinase; Belongs to the aspartokinase family. | 0.640 |
NFA_35040 | NFA_35030 | NFA_35040 | NFA_35030 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative aldehyde dehydrogenase. | 0.998 |
NFA_35040 | NFA_35050 | NFA_35040 | NFA_35050 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.729 |
NFA_35040 | NFA_35060 | NFA_35040 | NFA_35060 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative transporter. | 0.554 |
NFA_35040 | NFA_35070 | NFA_35040 | NFA_35070 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative glucarate dehydratase. | 0.988 |
NFA_35040 | NFA_49960 | NFA_35040 | NFA_49960 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Hypothetical protein. | 0.568 |
NFA_35040 | asd | NFA_35040 | NFA_3190 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.590 |
NFA_35040 | dapB | NFA_35040 | NFA_38810 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.677 |
NFA_35040 | gatC | NFA_35040 | NFA_42590 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.562 |
NFA_35040 | menA | NFA_35040 | NFA_51470 | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | Putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.694 |
NFA_35050 | NFA_35030 | NFA_35050 | NFA_35030 | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative aldehyde dehydrogenase. | 0.645 |
NFA_35050 | NFA_35040 | NFA_35050 | NFA_35040 | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. | 0.729 |
NFA_35050 | NFA_35060 | NFA_35050 | NFA_35060 | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative transporter. | 0.610 |
page 1 of 2