Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NFA_22290 | NFA_28450 | NFA_22290 | NFA_28450 | Cytochrome P450 monooxygenase. | Putative ring-cleavage dioxygenase large subunit. | 0.414 |
NFA_22290 | NFA_35210 | NFA_22290 | NFA_35210 | Cytochrome P450 monooxygenase. | Putative muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.493 |
NFA_28450 | NFA_22290 | NFA_28450 | NFA_22290 | Putative ring-cleavage dioxygenase large subunit. | Cytochrome P450 monooxygenase. | 0.414 |
NFA_28450 | NFA_35210 | NFA_28450 | NFA_35210 | Putative ring-cleavage dioxygenase large subunit. | Putative muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.537 |
NFA_28450 | NFA_35220 | NFA_28450 | NFA_35220 | Putative ring-cleavage dioxygenase large subunit. | Putative catechol 1,2-dioxygenase. | 0.577 |
NFA_28450 | NFA_35230 | NFA_28450 | NFA_35230 | Putative ring-cleavage dioxygenase large subunit. | Putative muconolactone delta-isomerase. | 0.687 |
NFA_35180 | NFA_35190 | NFA_35180 | NFA_35190 | Putative CoA transferase B subunit. | Putative CoA transferase A subunit. | 0.999 |
NFA_35180 | NFA_35200 | NFA_35180 | NFA_35200 | Putative CoA transferase B subunit. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.529 |
NFA_35180 | NFA_35210 | NFA_35180 | NFA_35210 | Putative CoA transferase B subunit. | Putative muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.578 |
NFA_35180 | NFA_35220 | NFA_35180 | NFA_35220 | Putative CoA transferase B subunit. | Putative catechol 1,2-dioxygenase. | 0.608 |
NFA_35180 | NFA_35230 | NFA_35180 | NFA_35230 | Putative CoA transferase B subunit. | Putative muconolactone delta-isomerase. | 0.659 |
NFA_35180 | fadA7 | NFA_35180 | NFA_35170 | Putative CoA transferase B subunit. | Putative acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.835 |
NFA_35190 | NFA_35180 | NFA_35190 | NFA_35180 | Putative CoA transferase A subunit. | Putative CoA transferase B subunit. | 0.999 |
NFA_35190 | NFA_35200 | NFA_35190 | NFA_35200 | Putative CoA transferase A subunit. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.529 |
NFA_35190 | NFA_35210 | NFA_35190 | NFA_35210 | Putative CoA transferase A subunit. | Putative muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.564 |
NFA_35190 | NFA_35220 | NFA_35190 | NFA_35220 | Putative CoA transferase A subunit. | Putative catechol 1,2-dioxygenase. | 0.587 |
NFA_35190 | NFA_35230 | NFA_35190 | NFA_35230 | Putative CoA transferase A subunit. | Putative muconolactone delta-isomerase. | 0.466 |
NFA_35190 | fadA7 | NFA_35190 | NFA_35170 | Putative CoA transferase A subunit. | Putative acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.826 |
NFA_35200 | NFA_35180 | NFA_35200 | NFA_35180 | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative CoA transferase B subunit. | 0.529 |
NFA_35200 | NFA_35190 | NFA_35200 | NFA_35190 | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative CoA transferase A subunit. | 0.529 |
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