STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2501ORF_ID:gll2501; similar to hydrocarbon oxygenase MocD. (333 aa)    
Predicted Functional Partners:
gll2500
Proable homoserine O-acetyltransferase; ORF_ID:gll2500; Belongs to the AB hydrolase superfamily. MetX family.
 
     0.938
gll2499
Glutamine synthetase III; ORF_ID:gll2499; Belongs to the glutamine synthetase family.
 
     0.927
gll2498
SOS response-associated protein; ORF_ID:gll2498; hypothetical protein; Belongs to the SOS response-associated peptidase family.
       0.505
glr2502
ORF_ID:glr2502; unknown protein.
       0.483
gll1531
Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.481
gll2497
ORF_ID:gll2497; unknown protein.
       0.473
gll2041
ORF_ID:gll2041; hypothetical protein.
  
     0.463
glr3497
ORF_ID:glr3497; unknown protein.
  
     0.455
gsl0042
ORF_ID:gsl0042; hypothetical protein.
  
     0.443
gsr0184
ORF_ID:gsr0184; hypothetical protein.
  
     0.417
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.