STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsl4025ORF_ID:gsl4025; hypothetical protein. (98 aa)    
Predicted Functional Partners:
glr1876
ORF_ID:glr1876; hypothetical protein.
 
     0.800
gll1966
ORF_ID:gll1966; hypothetical protein.
  
     0.774
gll2880
ORF_ID:gll2880; hypothetical protein.
  
     0.774
rps15
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
       0.773
gll4395
ORF_ID:gll4395; hypothetical protein.
  
     0.773
gll1742
ORF_ID:gll1742; hypothetical protein.
  
     0.771
gsr2010
ORF_ID:gsr2010; hypothetical protein.
  
     0.771
gll2484
ORF_ID:gll2484; hypothetical protein.
  
     0.771
glr4287
ORF_ID:glr4287; hypothetical protein.
  
     0.769
psbO
PsbO protein; ORF_ID:glr3691; similar to photosystem II manganese-stabilizing polypeptide.
  
     0.764
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.