STRINGSTRING
gll0020 protein (Gloeobacter violaceus) - STRING interaction network
"gll0020" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0020Hypothetical protein (456 aa)    
Predicted Functional Partners:
gll0019
Hypothetical protein (460 aa)
          0.948
gll0021
HlyB/MsbA family ABC transporter (605 aa)
 
          0.945
glr3105
Hypothetical protein (471 aa)
   
          0.710
gll1303
Hypothetical protein (472 aa)
   
          0.702
glr3106
Hypothetical protein (481 aa)
   
          0.687
glr0823
Hypothetical protein (1109 aa)
   
          0.680
gll1302
Hypothetical protein (494 aa)
   
          0.662
gll0363
Hypothetical protein (493 aa)
   
          0.533
gll0022
Two-component response regulator (222 aa)
              0.489
gll0023
Two-component sensor histidine kinase (508 aa)
              0.446
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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