STRINGSTRING
gll0142 protein (Gloeobacter violaceus) - STRING interaction network
"gll0142" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0142Hypothetical protein (128 aa)    
Predicted Functional Partners:
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes (172 aa)
              0.845
gll0145
Hypothetical protein (169 aa)
              0.832
gll0144
Hypothetical protein (146 aa)
              0.832
glr0146
Transposase (467 aa)
              0.639
gll1172
Hypothetical protein (241 aa)
   
          0.579
gsl0141
Hypothetical protein (60 aa)
              0.574
glr3449
Hypothetical protein (165 aa)
   
          0.464
gll3163
Hypothetical protein (307 aa)
   
          0.463
glr4099
Hypothetical protein (280 aa)
   
          0.430
gsl4025
Hypothetical protein (98 aa)
   
          0.420
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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