STRINGSTRING
gll0183 protein (Gloeobacter violaceus) - STRING interaction network
"gll0183" - Pseudouridine synthase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0183Pseudouridine synthase (314 aa)    
Predicted Functional Partners:
glr0056
Hypothetical protein (389 aa)
 
          0.692
glr3136
Hypothetical protein (233 aa)
   
          0.592
cphA
Cyanophycin synthetase (876 aa)
   
        0.587
glr2109
Recombination factor protein RarA/unknown domain fusion protein (747 aa)
 
        0.538
gsl0182
Hypothetical protein (94 aa)
              0.530
obg
GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control (335 aa)
 
 
  0.511
gll1406
Hypothetical protein (251 aa)
   
      0.490
glr2683
Hypothetical protein (173 aa)
   
          0.485
gll3765
Hypothetical protein (236 aa)
 
        0.483
glr4181
tRNA/rRNA methyltransferase (338 aa)
   
 
  0.478
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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