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gll0188 protein (Gloeobacter violaceus) - STRING interaction network
"gll0188" - TetR family transcriptional regulatory protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0188TetR family transcriptional regulatory protein (192 aa)    
Predicted Functional Partners:
gll0187
Hypothetical protein (113 aa)
              0.824
gll0189
Oxidoreductase (326 aa)
              0.695
gll1420
Transcriptional regulator (202 aa)
   
          0.671
gll0460
Hypothetical protein (471 aa)
   
          0.520
glr0191
Hypothetical protein (204 aa)
              0.493
glr0190
Monophosphatase (273 aa)
              0.493
glr2723
Hypothetical protein (764 aa)
   
          0.485
gll1228
Short-chain dehydrogenase (249 aa)
   
          0.484
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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