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gll0320 protein (Gloeobacter violaceus) - STRING interaction network
"gll0320" - AraC family transcriptional regulator in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0320AraC family transcriptional regulator (323 aa)    
Predicted Functional Partners:
gll0322
HlyB/MsbA family ABC transporter (615 aa)
 
   
  0.774
gll0321
HlyB/MsbA family ABC transporter (585 aa)
 
   
  0.734
gll0319
Ferrichrome-iron receptor (774 aa)
 
   
  0.724
glr2719
HlyB/MsbA family ABC transporter (595 aa)
 
     
  0.642
glr0353
Ferrichrome-iron receptor (745 aa)
 
   
  0.601
gll3976
Ferrichrome-iron receptor (745 aa)
 
   
  0.598
gll0361
Ferrichrome-iron receptor (736 aa)
 
   
  0.575
gll0323
Hypothetical protein (144 aa)
              0.574
glr2720
HlyB/MsbA family ABC transporter (583 aa)
 
     
  0.568
glr1159
Hypothetical protein (241 aa)
   
          0.555
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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