STRINGSTRING
gll0331 protein (Gloeobacter violaceus) - STRING interaction network
"gll0331" - Ferrichrome-iron receptor in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0331Ferrichrome-iron receptor (611 aa)    
Predicted Functional Partners:
gll0332
Ferrichrome-iron receptor (121 aa)
              0.840
glr2051
Hypothetical protein (708 aa)
   
          0.660
glr1304
Hypothetical protein (906 aa)
   
          0.651
glr4296
Hypothetical protein (916 aa)
   
          0.634
glr0333
Transposase (405 aa)
              0.627
gll1276
Hypothetical protein (932 aa)
   
          0.624
glr3352
Hypothetical protein (892 aa)
   
          0.606
gll1452
Hypothetical protein (777 aa)
   
          0.600
glr1380
Hypothetical protein (780 aa)
   
          0.576
glr1610
Hypothetical protein (752 aa)
   
          0.553
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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