STRINGSTRING
gll0360 protein (Gloeobacter violaceus) - STRING interaction network
"gll0360" - Ferrichrome-iron receptor in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0360Ferrichrome-iron receptor (127 aa)    
Predicted Functional Partners:
glr0354
Ferrichrome-iron receptor (157 aa)
 
          0.778
gll0362
Hypothetical protein (358 aa)
 
          0.682
gll0361
Ferrichrome-iron receptor (736 aa)
 
       
0.560
gll0324
AraC family transcriptional regulator (341 aa)
   
          0.513
gll0335
AraC family transcriptional regulator (327 aa)
   
          0.487
glr1304
Hypothetical protein (906 aa)
   
          0.443
glr3352
Hypothetical protein (892 aa)
   
          0.431
gll0320
AraC family transcriptional regulator (323 aa)
   
          0.424
gll1276
Hypothetical protein (932 aa)
   
          0.415
gll0302
Ferric aerobactin receptor (797 aa)
   
          0.411
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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