STRINGSTRING
gll0546 protein (Gloeobacter violaceus) - STRING interaction network
"gll0546" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0546Hypothetical protein (334 aa)    
Predicted Functional Partners:
gll1742
Hypothetical protein (202 aa)
   
        0.821
gll2020
Hypothetical protein (211 aa)
   
        0.773
psbO
Photosystem II manganese-stabilizing polypeptide (258 aa)
   
        0.771
glr3497
Hypothetical protein (171 aa)
   
          0.752
glr1039
Hypothetical protein (201 aa)
   
          0.720
gll0545
Hypothetical protein (210 aa)
              0.718
gll0544
Hypothetical protein (177 aa)
              0.718
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis (228 aa)
   
        0.705
glr0050
Hypothetical protein (324 aa)
   
          0.697
gll1659
Hypothetical protein (196 aa)
   
          0.693
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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