STRINGSTRING
gll0640 protein (Gloeobacter violaceus) - STRING interaction network
"gll0640" - Glucosamine-6-sulfatase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0640Glucosamine-6-sulfatase (834 aa)    
Predicted Functional Partners:
glr2769
Hypothetical protein (129 aa)
 
 
    0.982
glr1637
Hypothetical protein (405 aa)
     
    0.936
gll0641
Hypothetical protein (485 aa)
              0.671
gll0643
Hypothetical protein (333 aa)
              0.565
gll0642
Hypothetical protein (486 aa)
              0.565
glr2245
Hypothetical protein (437 aa)
 
   
  0.512
gll0644
Hypothetical protein (391 aa)
              0.501
gll0646
N-acetylglucosamine 6-sulfatase (515 aa)
 
       
0.452
glr0464
Hypothetical protein (312 aa)
   
          0.407
gll0645
Hypothetical protein (509 aa)
              0.400
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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