STRINGSTRING
gll0887 protein (Gloeobacter violaceus) - STRING interaction network
"gll0887" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0887Hypothetical protein (316 aa)    
Predicted Functional Partners:
glr2310
Hypothetical protein (210 aa)
 
          0.859
gll0886
Hypothetical protein (269 aa)
              0.859
glr3355
Hypothetical protein (323 aa)
 
          0.846
glr0668
Hypothetical protein (242 aa)
 
          0.839
hemD
Uroporphyrinogen III synthase/methyltransferase (508 aa)
   
   
  0.773
nadC
Nicotinate-nucleotide pyrophosphorylase (296 aa)
         
  0.693
glr2681
Transcription regulator AsnC (157 aa)
   
 
  0.670
glr0890
ABC transporter permease (496 aa)
              0.532
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (227 aa)
              0.532
gll0564
Mercuric reductase (507 aa)
 
          0.509
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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