STRINGSTRING
gll0938 protein (Gloeobacter violaceus) - STRING interaction network
"gll0938" - Proteinase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0938Proteinase (815 aa)    
Predicted Functional Partners:
pheT
phenylalanyl-tRNA synthetase subunit beta (785 aa)
   
        0.619
gll0937
Hypothetical protein (269 aa)
              0.511
glr4424
Phosphoribulokinase (309 aa)
 
        0.504
glr2921
Hypothetical protein (221 aa)
   
          0.504
gll3209
Hypothetical protein (188 aa)
   
          0.494
glr3336
Hypothetical protein (105 aa)
   
          0.480
glr0419
Hypothetical protein (128 aa)
 
          0.471
glr1019
Hypothetical protein (587 aa)
         
  0.466
glr1149
Hypothetical protein (651 aa)
   
          0.460
glr3842
Hypothetical protein (599 aa)
   
          0.453
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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