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gll0948 protein (Gloeobacter violaceus) - STRING interaction network
"gll0948" - ABC transporter permease in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0948ABC transporter permease (552 aa)    
Predicted Functional Partners:
gll4125
Oligopeptide ABC transporter permease (306 aa)
  0.985
gll4123
Oligopeptide ABC transporter ATP-binding protein (327 aa)
  0.981
gll4124
Oligopeptide ABC transporter permease (306 aa)
  0.977
gll4122
Oligopeptide ABC transporter ATP-binding protein (349 aa)
  0.975
gll4126
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein (546 aa)
   
   
 
0.807
gll0947
Alginate O-acetylation protein (495 aa)
              0.508
gll0946
Hypothetical protein (369 aa)
              0.508
gsl0949
Hypothetical protein (75 aa)
              0.507
glr4128
Two-component response regulator (234 aa)
       
 
  0.429
glr3139
Two-component response regulator (229 aa)
       
 
  0.429
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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