STRINGSTRING
gll0957 protein (Gloeobacter violaceus) - STRING interaction network
"gll0957" - Dioxygenase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0957Dioxygenase (357 aa)    
Predicted Functional Partners:
gll0956
Hypothetical protein (397 aa)
 
          0.818
gll0958
Urea amidolyase (1202 aa)
              0.677
gll0959
Hypothetical protein (219 aa)
              0.600
gll0960
Hypothetical protein (238 aa)
              0.582
gll3111
Hypothetical protein (289 aa)
 
   
  0.547
gll2289
Dioxygenase (187 aa)
 
     
  0.461
gll0027
Hypothetical protein (360 aa)
   
          0.404
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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