STRINGSTRING
gll0209 protein (Gloeobacter violaceus) - STRING interaction network
"gll0209" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll0209Transposase (351 aa)    
Predicted Functional Partners:
glr0172
Transposase (371 aa)
   
          0.743
glr1106
Beta-hydroxylase (121 aa)
              0.636
gll4410
Hypothetical protein (677 aa)
   
          0.624
gll3344
Hypothetical protein (845 aa)
   
          0.578
glr1904
Hypothetical protein (909 aa)
   
          0.554
glr1560
Hypothetical protein (259 aa)
   
          0.521
glr4051
Hypothetical protein (221 aa)
   
          0.519
gll3307
Hypothetical protein (284 aa)
   
          0.517
gll1513
Hypothetical protein (253 aa)
   
          0.502
glr1329
Hypothetical protein (260 aa)
   
          0.501
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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