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gll1140 protein (Gloeobacter violaceus) - STRING interaction network
"gll1140" - ExbD/TolR family protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1140ExbD/TolR family protein (143 aa)    
Predicted Functional Partners:
gll1141
tolQ-type transport protein (220 aa)
 
 
  0.988
glr1815
Hypothetical protein (261 aa)
 
 
  0.851
glr1387
MotA/TolQ/ExbB family proton channel protein (211 aa)
 
 
  0.832
glr1387
Hypothetical protein (211 aa)
 
 
  0.832
glr1389
Hypothetical protein (232 aa)
 
 
  0.824
glr2404
Hypothetical protein (256 aa)
 
 
  0.823
glr2403
Biopolymer transport ExbD protein (140 aa)
   
          0.683
gsl1139
Hypothetical protein (73 aa)
              0.569
gll1138
Hypothetical protein (100 aa)
              0.569
glr1828
Hypothetical protein (227 aa)
 
 
 
  0.552
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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