STRINGSTRING
gll1167 protein (Gloeobacter violaceus) - STRING interaction network
"gll1167" - Glucose dehydrogenase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1167Glucose dehydrogenase (368 aa)    
Predicted Functional Partners:
gll1168
Hypothetical protein (896 aa)
              0.712
gll1166
Hypothetical protein (186 aa)
              0.657
gll0781
FGGY family sugar kinase (462 aa)
 
   
  0.648
glr4349
Oxidoreductase (383 aa)
 
 
  0.593
gll3495
Pyruvate kinase (605 aa)
 
 
  0.561
gll1088
Hypothetical protein (397 aa)
   
   
  0.548
bvdR
Biliverdin reductase (332 aa)
   
 
  0.537
glr1860
Oxidoreductase (343 aa)
   
 
  0.537
glr3506
3-oxoacyl-ACP reductase (248 aa)
   
   
  0.530
gll4347
Oxidoreductase (268 aa)
   
   
  0.530
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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