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gll1275 protein (Gloeobacter violaceus) - STRING interaction network
"gll1275" - Histone deacetylase family protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1275Histone deacetylase family protein (307 aa)    
Predicted Functional Partners:
glr2266
Helicase (1008 aa)
     
  0.927
gll2741
Hypothetical protein (1066 aa)
     
  0.927
gll2418
Helicase (1054 aa)
     
  0.927
gll3806
Hypothetical protein (536 aa)
   
    0.906
glr1649
Hypothetical protein (502 aa)
   
    0.906
glr4289
Hypothetical protein (504 aa)
   
    0.906
gll3259
Hypothetical protein (507 aa)
   
    0.906
gll0242
Cell division control protein CDC48-like protein (574 aa)
   
    0.906
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity (614 aa)
     
  0.905
smc
Chromosome segregation SMC protein; Required for chromosome condensation and partitioning (1165 aa)
   
  0.901
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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