STRINGSTRING
gll1406 protein (Gloeobacter violaceus) - STRING interaction network
"gll1406" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1406Hypothetical protein (251 aa)    
Predicted Functional Partners:
gll1405
Hypothetical protein (455 aa)
 
 
  0.939
gll1408
Hypothetical protein (746 aa)
 
          0.887
gll1407
Hypothetical protein (663 aa)
              0.859
gll1404
ABC transporter ATP-binding protein (372 aa)
              0.856
gll1403
ABC transporter permease (284 aa)
              0.856
gll1402
ABC transporter permease (261 aa)
              0.856
gll3155
Hypothetical protein (174 aa)
   
          0.778
gsr4132
Hypothetical protein (70 aa)
   
          0.770
sbcC
Hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (1002 aa)
   
 
    0.728
gll4323
Hypothetical protein (547 aa)
   
          0.707
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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